Genetics and genomics of setaria andrew doust springer. Foxtail millet, scientific name setaria italica synonym panicum italicum l. Genomewide identification, characterization, and expression. Pdf the occurrence and identification of setaria italica. In this study, the transcriptome of foxtail millet under lownitrogen stress was systematically analyzed. It is the secondmost widely planted species of millet, and the most grown millet species in asia. Setaria italica synonyms, setaria italica pronunciation, setaria italica translation, english dictionary definition of setaria italica.
Italian millet, italian foxtail, german millet, siberian millet, foxtail bristlegrass, foxtailmillet. Molecules free fulltext assessment of diversity in. Setaria italica and its wild ancestor setaria viridis are diploid c 4 grasses with small genomes of. Superoxide dismutases sods play important roles in plant growth, development, and response to abiotic stresses.
While loss of shattering has been an important early step in the domestication of all cultivated grasses, the genes involved generally differ among species 7,912. According to archeological evidence, foxtail millet was domesticated from green foxtail approximately 9,000 to 6,000 ybp in china. An setaria italica in nahilalakip ha genus nga setaria, ngan familia nga poaceae. In tropical and subtropical rain forests, tropical and subtropical wet sclerophyll forests, dry.
N2 fixation by azospirillum brasilense and its incorporation. Despite sod gene families have been identified in various plant species, little is known in foxtail millet setaria italica l. Instabilite chromosomique dans les tissus somatiques des descendants dun hybride interspecifique setaria verticillata p. Synonyms for setaria italica rubrofructa in free thesaurus. Pagka karon wala pay siak nga nalista ubos niini niya. Growth and nitrogen fixation were followed during the life cycle of setaria italica foxtail millet inoculated with azospirillum brasilense in controlledenvironment growth chambers.
Foxtail millet is an erect annual grass, fastgrowing. A phenotypic diversity analysis of foxtail millet setaria italica l. Foxtail millet is usually grown for its grain see the foxtail millet grain datasheet but it is also cultivated as a fodder plant foxtail millet is an erect annual grass, fastgrowing, leafy and tufted, 90220 cm high. An efficient and improved transformation method for functional genetics studies in s. Pdf genomewide characterization of microrna in foxtail. Setaria italica limelight spray limelight lime light. In addition, users can learn about the location of vouchered specimens and see images to get a better visual for each plant. It is also grown on a moderate scale in other parts of the world as a forage crop. Structural analysis of sod genes of setaria italica, setaria viridis, and oryza sativa were performed using the gsds server fig. Low nitrogen had negative effects on accumulation of free amino acids, and the concentration of total free amino acids decreased by. The new york flora atlas is a source of information for the distribution of plants within the state, as well as information on plant habitats, associated ecological communities, and taxonomy. Setaria is widely grown for grazing by dairy and beef cattle, but high oxalate levels make it undesirable for horses and donkeys. Mar 25, 2020 setaria italica f a taxonomic species within the family poaceae foxtail millet, a common food grain, probably originating in southern china.
The structure of sifgd displays the main contents of the database. Setaria viridis is a member of the panicoideae clade and is a close relative of several major feed, fuel, and bioenergy grasses. Some recent discoveries of millet panicum miliaceum l. Pdf foxtail millet, setaria italica is still cultivated in mazandaran niran. Pdf some recent discoveries of millet panicum miliaceum. It is also known as italian millet, german millet and hay millet. Setaria italica synonyms, setaria italica antonyms. Consultative group on international agricultural research cgiar, research. Setaria italica foxtail millet is a grain crop widely grown in asia with particular significance in semiarid regions of northern china.
Setaria italica rubrofructa, siberian millet millet having orange to reddish grains in long bristly spikes german. This from a 17th century pirate edition or atlas of illustrations only, with captions in latin, greek, french, italian, german, and in. Hungarian grass, setaria italica also called panicum italicum, a native of eastern asia is one of the most wholesome and palatable indian cereals. Setaria italic with many common names including chinese millet, foxtail bristle grass, dwarf setaria, foxtail millet, hay millet, german millet, giant setaria hungarian millet, japanese millet, italian millet, red rala, liberty millet and hungarian millet is a grass species which is used as a crop. Setaria italica functional genomics database cell press. Setaria article about setaria by the free dictionary. Antioxidant activity of extracts from foxtail millet setaria italica. Setaria annual or perennial grasses of warm regions. It is one of the oldest domesticated crops with archeological remains from 5,500 to 5,900 years bc in northern china. The inflorescence is a cylindrical or, less commonly, somewhat lobular spicate panicle with very short branchlets. Setaria for coastal pastures department of primary industries. Assessment of diversity in the accessions of setaria italica l.
Foxtail millet setaria italica, consumed by the rural and tribal populations in south india. Foxtail millet setaria italica is a short life cycle c4 plant, with sequenced genome, and a potential model plant for c4 species. Antioxidant potential of seeds was estimated by the 1,1diphenyl2picrylhydrazyl dpph radical scavenging assay, and antimicrobial activity was determined by evaluating the minimum inhibitory concentration mic. Foxtail millet setaria italica plant guide the plants database. The effect of fermentation on the primary nutrients in foxtail millet.
All structured data from the file and property namespaces is available under the creative commons cc0 license. Known as foxtail millet, setaria macrocheata is used in dried and fresh cut flower arrangements to give vertical accent. However, the mechanism of foxtail millet tolerance to. During maturation of the plants, substantial nitrogenase activity, measured by. Foxtail millet setaria italica, grain feedipedia 09122016 14. In the present study, we resequenced a foxtail millet population of 439 recombinant inbred lines rils and developed highresolution bin map and high. The atlas of florida plants provides a source of information for the distribution of plants within the state and taxonomic information. B the motif analysis page for motif scans and signi.
As members of the panicoideae subfamily, setaria italica foxtail millet and its wild ancestor setaria viridis, are novel model species for understanding basic biological processes. Grow setaria italica seeds for a vigorous, robust annual millet that has many uses. Foxtail millet setaria italica has small pointed seeds. May, 2012 foxtail millet setaria italica, a member of the poaceae grass family, is an important food and fodder crop in arid regions and has potential for use as a c 4 biofuel. Its short stature, simple growth requirements, and rapid life cycle will greatly facilitate genetic studies of the c4 grasses. It is a true diploid with a relatively small genome of 510 mb. Media in category setaria italica the following 31 files are in this category, out of 31 total. Files are available under licenses specified on their description page. The point of disarticulation below the glumes in s. The occurrence and identification of setaria italica l. It is grown for hay in north america and western europe, and it is an important food crop in china and other asian countries.
The wild types are considered to represent setaria viridis green foxtail millet, the cultivated ones setaria italica foxtail millet. Ijms free fulltext simyb3 in foxtail millet setaria. Three species of setaria have been domesticated and. The spikelets are twoflowered and surrounded by rough bristles, or setae. Handcoloured woodblock engraving of a botanical illustration from adam lonicers krauterbuch, or herbal, frankfurt, 1557. Ang setaria italica sakop sa kahenera nga setaria sa kabanay nga poaceae. Structure of the setaria italica functional genome database. Foxtail milletsetaria italica health benefits times. Setaria italica rubrofructa synonyms, setaria italica. Click download or read online button to get italica book now. Foxtail millet is usually grown for its grain see the foxtail millet grain datasheet but it is also cultivated as a fodder plant. Bailey classification click on a scientific name below to expand it in the plants classification report.
It is an introduced, annual, warmseason crop that grows 2 to 5 feet tall. Setaria viridis green foxtail is one of the worlds most. Kellogg and joyce van eck, journalthe plant cell, year2010. Pdf setaria viridis and setaria italica, model genetic. Setaria is a widespread genus of plants in the grass family the name is derived from the latin word seta, meaning bristle or hair, which refers to the bristly spikelets the genus includes over 100 species distributed in many tropical and temperate regions around the world, and members are commonly known as foxtail or bristle grasses. The species is hermaphrodite has both male and female organs and is pollinated by wind.
Foxtail millet setaria italica is a small diploid c4 panicoid crop species, whose genome is being sequenced by the joint genome institute jgi of the department of energy. The results can also be downloaded as a csv file unicode utf8 encoding see status, confidence level, source for. Both species have attributes that make them attractive as model systems. Ijms free fulltext simyb3 in foxtail millet setaria italica. Setaria italica f a taxonomic species within the family poaceae foxtail millet, a common food grain, probably originating in southern china. Setaria italica and its wild ancestor setaria viridis are diploid c4 grasses with small genomes of.
It is in flower from august to october, and the seeds ripen from september to october. Genomewide characterization of microrna in foxtail millet setaria italica. Setaria viridis and setaria italica, model genetic systems. In this study, a systematic analysis of sod gene family was performed in foxtail millet and the expression pattern of sod genes in response to abiotic.
This study was carried out to evaluate genetic diversity, phenolic compound composition, and biological activity of setaria italica l. Expression of 1891 genes was altered, including 18 upregulated genes and 573 down. Feb 20, 20 it is also largely used for feeding poultry, for which purpose mainly it is imported. Setaria italica foxtail millet is the domesticated form of s. Setaria italica definition of setaria italica by the free. May 01, 2017 foxtail millet setaria italica is an important crop possessing c4 photosynthesis capability. Traditionally, the seed flour from these plants was mainly. Smithsonian institution, hosted by the usdanrcs plants database. Brutnell and lin wang and kerry swartwood and alexander goldschmidt and david jackson and xinguang zhu and elizabeth a.
Rather than decades, it will soon be possible to obtain draft genome sequences in a matter of months or weeks eid et al. Thus, the availability of genome sequence soon will not be a limiting factor in developing. An improved protocol for efficient transformation and. Kangni, navane, tenai, korra, rala, and kauni are the common names of foxtail millet in different parts of india. Nov 16, 2018 structural analysis of sod genes of setaria italica, setaria viridis, and oryza sativa were performed using the gsds server fig. Setaria definition of setaria by the free dictionary. Setaria italica is a grain crop widely grown in northern china and india that is closely related to the major food and feed crops maize and sorghum. The plants are perennial or annual herbs with flat leaf blades. Foxtail millet is grown in cooler, drought regions than other millets. The website also provides access to a database and images of herbarium specimens found at the university of south florida and other herbaria. Foxtail millet setaria italica is an important crop possessing c4 photosynthesis capability. The rationale for sequencing foxtail millet is that it is closely related to the bioenergy grasses switchgrass panicum. Splenda setaria is suited to the wet tropics of north queensland and as a cut and carry forage for asia and the pacific.
In the present study, we resequenced a foxtail millet population of 439 recombinant inbred lines rils and developed highresolution bin map and. A comparative analysis of polyamines, their biosynthetic enzymes at kinetic and at transcriptional level, and their role in regulating the induction of antioxidant defense enzymes under salt stress condition in two foxtail millet setaria italica l. It is believed to originate from northern china 2,3 and is cultivated worldwide 4,5,6 in acidic and semiarid regions. Foxtail millet, belonging to the poaceae family, is an important human food in asia, europe, and africa. Foxtail millet can be stunted or killed by pyricularia leaf spot vollmer et al. Epicuticular waxes of panicum miliaceum, panicum texanum and. The setaria viridis genome and diversity panel enables.
The wild types are considered to represent setaria viridis green foxtail millet, the cultivated ones setaria italica. Pages in category setaria the following 16 pages are in this category, out of 16 total. Italian millet, setaria italica, and rice, oryza sativa. Setaria italica coarse droughtresistant annual grass grown for grain, hay, and forage in europe and asia and chiefly for forage and hay in united. A the quick search page for gene information, metabolic pathways, and ortholog transformation. Nitrogen response in setaria italica grain number and genotype drive nitrogendependent yield response in the c4 model setaria italica l. Composition and yield of epicuticular waxes from panicum miliaceum, p. Setaria viridis green foxtail and its domesticated relative s. A total of 23 381 foxtail millet landraces of chinese origin were analysed for seven qualitative traits and four quantitative traits. The plants were fertilized at seeding with a limiting amount of combined nitrogen and maintained with an n free mineral solution.
However, the mechanism of foxtail millet tolerance to lownitrogen stress is still unknown. Bristles retrorsely barbed, adhering tenaciously to clothing. Setaria italica definition of setaria italica by the. Domestication and improvement in the model c4 grass, setaria. Recent advances in sequencing technologies are transforming the field of plant science wang et al. This site is like a library, use search box in the widget to get ebook that you want. Chromosomal instability in the somatic tissues of descendants of an interspecific hybrid of setaria verticillata s. Based on phytochemical and morphological traits and issr markers. Oldest evidence of foxtail millet is found along the ancient course of yellow river in cishan, china, carbon dated to be 8700 bc. Several hypotheses concerning the origin and domestication. Foxtail millet setaria italica, grain feedipedia agritrop cirad. Genotypespecific physiological and transcriptomic responses. Setaria synonyms, setaria pronunciation, setaria translation, english dictionary definition of setaria.
Foxtail millet setaria italica, which originated in china, has a strong tolerance to low nutrition stresses. Foxtail millet is thought to be native to southern asia and is considered one of the oldest cultivated millets. Foxtail millet setaria italica is a member of the poaceae grasses that was initially domesticated from the wild species of s. Narok and solander setaria are the varieties approved for nsw. Adams 2, and jack dekker 3 1 weed biology laboratory, department of agronomy, iowa state university, ames, ia 50011. It has a long history of use, being cultivated since approximately 8700 years ago.
Hungarian grass, italian millet, foxtail millet types. Assessment of diversity in the accessions of setaria italica. Polyamine metabolism influences antioxidant defense. Pdf millets are considered nutricereals which play a crucial part in overcoming malnutrition and have a significant role in.
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